STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K_0978-t1FCP1 homology domain-containing protein. (489 aa)    
Predicted Functional Partners:
G7K_0924-t1
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
 
  
   0.905
G7K_5868-t1
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.893
G7K_0962-t1
LNS2 domain-containing protein.
    
 0.846
G7K_1063-t1
Uncharacterized protein.
    
 0.807
G7K_1552-t1
Uncharacterized protein.
    
 0.776
G7K_6435-t1
RPOL4c domain-containing protein.
    
 0.757
G7K_2431-t1
Uncharacterized protein.
    
 0.749
G7K_0210-t1
Uncharacterized protein.
    
 0.735
G7K_4809-t1
Uncharacterized protein.
    
 0.735
G7K_2134-t1
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
    
 0.734
Your Current Organism:
Saitoella complicata
NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.