STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K_1123-t1RING-CH-type domain-containing protein. (1198 aa)    
Predicted Functional Partners:
G7K_4151-t1
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 
 0.964
G7K_1537-t1
CUE domain-containing protein.
    
 
 0.946
G7K_4261-t1
UBX domain-containing protein.
    
 
 0.933
G7K_3849-t1
FK506-binding protein.
    
 
 0.915
G7K_3370-t1
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.793
G7K_4943-t1
Uncharacterized protein.
    
 
 0.793
G7K_6518-t1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.789
G7K_6086-t1
RING-type domain-containing protein; Belongs to the complex I 20 kDa subunit family.
    
 
 0.770
G7K_3836-t1
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.685
G7K_0446-t1
Uncharacterized protein.
    
 
 0.653
Your Current Organism:
Saitoella complicata
NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.