STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K_1475-t1Hist_deacetyl domain-containing protein. (1204 aa)    
Predicted Functional Partners:
G7K_6455-t1
Nsp1_C domain-containing protein.
     
 0.999
G7K_2380-t1
Response regulatory domain-containing protein.
    
 0.994
G7K_3322-t1
WD_REPEATS_REGION domain-containing protein.
   
 0.855
G7K_4956-t1
MRG domain-containing protein.
    
 0.815
G7K_6597-t1
Uncharacterized protein.
    
 0.813
G7K_6271-t1
ENDO3c domain-containing protein.
    
 0.789
G7K_6724-t1
RRN7-type domain-containing protein.
    
  0.784
G7K_4325-t1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
  
 
 0.776
G7K_6383-t1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
  
 
 0.774
G7K_4895-t1
Serine/threonine-protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDC5/Polo subfamily.
    
 0.771
Your Current Organism:
Saitoella complicata
NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.