STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K_2447-t1USP domain-containing protein; Belongs to the peptidase C19 family. (1085 aa)    
Predicted Functional Partners:
G7K_3045-t1
Uncharacterized protein.
   
 0.887
G7K_4517-t1
Uncharacterized protein.
   
 0.887
G7K_6724-t1
RRN7-type domain-containing protein.
    
 0.878
G7K_5677-t1
Uncharacterized protein.
    
 0.858
G7K_3266-t1
Uncharacterized protein; Belongs to the peptidase C19 family.
   
 0.812
G7K_2721-t1
E3 ubiquitin-protein ligase.
    
 
 0.787
G7K_4048-t1
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.767
G7K_6503-t1
Phosphatase tensin-type domain-containing protein.
   
 0.743
G7K_3023-t1
Ubiquitin-like domain-containing protein.
    
 0.730
G7K_4275-t1
Uncharacterized protein.
    
 0.703
Your Current Organism:
Saitoella complicata
NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.