STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K_2457-t1Rab-GAP TBC domain-containing protein. (720 aa)    
Predicted Functional Partners:
G7K_1859-t1
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.817
G7K_3515-t1
Uncharacterized protein.
   
 
 0.761
G7K_3566-t1
Uncharacterized protein.
   
 
 0.631
G7K_4037-t1
Rab-GAP TBC domain-containing protein.
    
 
0.463
G7K_2344-t1
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
 
 0.458
G7K_4835-t1
Rab-GAP TBC domain-containing protein.
    
 
 0.452
G7K_0635-t1
Uncharacterized protein.
    
 
 0.451
G7K_4474-t1
PX domain-containing protein.
    
 
 0.450
Your Current Organism:
Saitoella complicata
NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.