STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K_2081-t1TPR_REGION domain-containing protein. (458 aa)    
Predicted Functional Partners:
G7K_0076-t1
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
  
 
 0.989
G7K_0328-t1
Ribosomal_S10 domain-containing protein.
  
 
 0.989
G7K_1384-t1
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.989
G7K_1639-t1
Elp3 domain-containing protein.
  
 
 0.989
G7K_2597-t1
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.989
G7K_2824-t1
Ribosomal_L23eN domain-containing protein.
  
 
 0.989
G7K_2998-t1
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.989
G7K_3183-t1
zf-CHCC domain-containing protein; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.989
G7K_3233-t1
Uncharacterized protein.
  
 
 0.989
G7K_4202-t1
Uncharacterized protein.
  
 
 0.989
Your Current Organism:
Saitoella complicata
NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.