STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K_2401-t1ATP-dependent Clp protease proteolytic subunit. (229 aa)    
Predicted Functional Partners:
G7K_4068-t1
Uncharacterized protein.
 0.998
G7K_5954-t1
Uncharacterized protein.
  
 
 0.975
G7K_6617-t1
Uncharacterized protein; Belongs to the ClpA/ClpB family.
  
 
 0.975
G7K_2446-t1
Uncharacterized protein.
   
 
 0.786
G7K_4202-t1
Uncharacterized protein.
  
 
 0.745
G7K_5058-t1
Peptidyl-prolyl cis-trans isomerase.
  
 
 0.711
G7K_0777-t1
Aminotran_5 domain-containing protein.
  
  0.701
G7K_1652-t1
Aminotran_5 domain-containing protein.
  
  0.701
PIM1
Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.
  
 
 0.695
G7K_5090-t1
Lon protease homolog; Belongs to the peptidase S16 family.
  
 
 0.695
Your Current Organism:
Saitoella complicata
NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.