STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K_3110-t1HECT domain-containing protein. (973 aa)    
Predicted Functional Partners:
G7K_3045-t1
Uncharacterized protein.
   
 0.776
G7K_4517-t1
Uncharacterized protein.
   
 0.776
G7K_6209-t1
MPN domain-containing protein.
    
 
 0.717
G7K_1213-t1
HECT domain-containing protein.
   
 
0.666
G7K_1605-t1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.660
G7K_2658-t1
U-box domain-containing protein.
   
 
 0.646
G7K_6605-t1
RING-type domain-containing protein.
   
 0.625
G7K_4275-t1
Uncharacterized protein.
    
 0.611
G7K_5174-t1
Uncharacterized protein.
    
 0.609
G7K_5187-t1
Uncharacterized protein.
    
 0.609
Your Current Organism:
Saitoella complicata
NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.