STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K_3700-t1Uncharacterized protein. (1599 aa)    
Predicted Functional Partners:
G7K_5658-t1
Phosphatidylinositol 3-kinase VPS34.
   
 0.999
G7K_6144-t1
Uncharacterized protein.
    
 0.998
G7K_4805-t1
Protein kinase domain-containing protein.
    
 0.989
G7K_1189-t1
Uncharacterized protein.
 
  
  0.926
G7K_1102-t1
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
     
 0.848
G7K_0590-t1
Autophagy-related protein.
     
 0.842
G7K_3659-t1
Uncharacterized protein.
     
 0.832
G7K_5474-t1
Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.
     
 0.828
G7K_2344-t1
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.823
G7K_0121-t1
ATG16 domain-containing protein.
     
 0.816
Your Current Organism:
Saitoella complicata
NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.