STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K_4022-t1Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. (362 aa)    
Predicted Functional Partners:
G7K_3822-t1
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
 
 
 0.965
G7K_4124-t1
Uncharacterized protein.
 
 0.949
G7K_2305-t1
HEM4 domain-containing protein.
  
 
 0.890
G7K_0255-t1
Uncharacterized protein.
  
 0.879
G7K_6119-t1
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
  
 0.868
G7K_4400-t2
Uncharacterized protein; Belongs to the precorrin methyltransferase family.
    
 0.744
G7K_4400-t1
Uncharacterized protein; Belongs to the precorrin methyltransferase family.
    
 0.744
G7K_3590-t1
Flavodoxin-like domain-containing protein.
    
  0.678
G7K_6687-t1
Uncharacterized protein.
    
 0.645
G7K_0464-t1
Uncharacterized protein.
    
 0.629
Your Current Organism:
Saitoella complicata
NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.