STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K_5569-t1GH16 domain-containing protein. (527 aa)    
Predicted Functional Partners:
G7K_6455-t1
Nsp1_C domain-containing protein.
    
 0.778
G7K_1004-t1
Uncharacterized protein.
    
 0.721
G7K_4577-t1
B30.2/SPRY domain-containing protein.
    
 0.716
G7K_3312-t1
UBA domain-containing protein.
    
 0.708
G7K_0863-t1
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.704
G7K_2751-t1
Uncharacterized protein.
    
 0.701
G7K_3880-t1
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.695
G7K_4805-t1
Protein kinase domain-containing protein.
    
 0.695
G7K_5179-t1
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.694
G7K_1580-t1
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.683
Your Current Organism:
Saitoella complicata
NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.