STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K_6320-t2VWFA domain-containing protein. (455 aa)    
Predicted Functional Partners:
G7K_2852-t1
Uncharacterized protein.
    
 0.707
G7K_5020-t1
Nuclear cap-binding protein subunit 2.
    
 0.706
G7K_6395-t1
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.698
G7K_3091-t1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.696
G7K_4917-t1
RRM domain-containing protein.
    
 0.690
G7K_3292-t1
Uncharacterized protein.
    
 0.682
G7K_0942-t1
Uncharacterized protein.
    
  0.681
G7K_1019-t1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.674
G7K_5275-t1
Uncharacterized protein.
   
  0.672
G7K_6435-t1
RPOL4c domain-containing protein.
    
 0.671
Your Current Organism:
Saitoella complicata
NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.