STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK74263.1Putative TonB family protein. (293 aa)    
Predicted Functional Partners:
CCK77538.1
TonB-dependent outer membrane receptor protein.
  
 
 0.916
CCK76243.1
Biopolymer transport protein of family ExbD/TolR.
 
 
 0.884
CCK76244.1
Biopolymer transport protein.
 
 
 0.868
pyrR
Bifunctional protein pyrR [Pyrimidine operon regulatory protein; Uracil phosphoribosyltransferase].
 
     0.834
CCK74261.1
Holliday junction resolvase YqgF family; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
  
    0.822
CCK74262.1
Conserved hypothetical protein; Belongs to the UPF0301 (AlgH) family.
       0.817
CCK74221.1
TonB-dependent receptor.
  
 
 0.787
CCK75697.1
TonB-dependent receptor.
  
 
 0.787
CCK77736.1
TonB-dependent receptor.
  
 
 0.787
CCK77221.1
TonB-dependent receptor.
 
 
 0.784
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.