STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK74568.1Probable transcriptional regulator, TetR family. (195 aa)    
Predicted Functional Partners:
CCK77626.1
Conserved hypothetical protein.
  
     0.619
CCK74695.1
Hypothetical protein.
  
    0.552
CCK77914.1
Methyltransferase.
  
     0.487
CCK77038.1
Conserved hypothetical protein.
  
     0.457
rimL
Putative Ribosomal-protein-alanine acetyltransferase.
  
     0.440
CCK76250.1
Hydrolase.
  
     0.440
CCK77667.1
Probable transcriptional regulator, MerR family.
  
     0.435
CCK75144.1
Paraquat-inducible protein A.
  
     0.431
CCK74567.1
Acyl-CoA dehydrogenase (probable).
       0.424
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.