STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK74628.1Putative anti-sigma factor antagonist. (104 aa)    
Predicted Functional Partners:
CCK74625.1
ABC-type transport system involved in resistance to organic solvents, ATPase component.
  
 0.950
CCK74627.1
Toluene tolerance ABC transporter, periplasmic substrate-binding protein.
  
 0.949
CCK74626.1
ABC-type transport system involved in resistance to organic solvents, permease component.
  
 0.946
CCK74519.1
Toluene tolerance family protein.
  
 
 0.895
CCK75977.1
Hypothetical protein.
  
  
 0.502
CCK74629.1
Transcriptional regulator (BolA family); Belongs to the BolA/IbaG family.
       0.475
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.432
CCK74624.1
Ca2+/Na+ antiporter.
       0.421
CCK74623.1
KpsF/GutQ family protein.
     
 0.411
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.