STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK75187.1Putative response regulator. (227 aa)    
Predicted Functional Partners:
CCK75189.1
Sensor protein.
 
 
 0.945
CCK77378.1
Putative sensor protein.
 
 0.844
CCK77827.1
Sensor protein.
 
 
 0.843
CCK76946.1
Sensor protein.
  
 
 0.828
CCK75643.1
Sensor protein.
  
 
0.819
CCK75188.1
Hypothetical protein.
 
     0.811
CCK77581.1
Sensor protein.
 
   0.782
CCK77821.1
Sensor protein.
 
 
 0.758
CCK77357.1
Sensor protein.
 
 
 0.744
CCK75276.1
Sensor protein.
 
 0.729
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.