STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilZSimilar to type IV pilus assembly protein PilZ. (285 aa)    
Predicted Functional Partners:
fliD
Flagellar capping protein.
 
    0.892
flgE
Flagellar hook protein.
 
  
 0.856
flgK
Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.856
flgM
Negative regulator of flagellin synthesis (Anti-sigma28 factor).
  
  
 0.830
CCK76489.1
Conserved hypothetical protein.
 
 
 0.818
CCK76485.1
Conserved hypothetical protein.
  
     0.765
CCK77102.1
Hypothetical protein.
  
     0.763
CCK75099.1
Conserved hypothetical protein.
  
     0.761
CCK74557.1
Conserved hypothetical protein.
  
     0.758
CCK74296.1
Conserved hypothetical protein.
  
     0.741
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.