STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neuBPutative polysaccharide biosynthesis protein. (348 aa)    
Predicted Functional Partners:
neuA
NeuA protein/acylneuraminate cytidylyltransferase.
 
 
 0.982
spsG
Probable pore coat polysaccharide biosynthesis protein.
 
  
 0.971
CCK75578.1
Putative DegT/DnrJ/EryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.952
CCK75577.1
Polysaccharide biosynthesis protein.
 
  
 0.942
kdsC
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.
    
 0.782
CCK76153.1
Putative capsular polysaccharide biosynthesis glycosyltransferase.
  
  
 0.591
CCK76129.1
Glycosyl transferase, group 2 family protein.
  
  
 0.587
CCK76144.1
Glycosyl transferase, group 1.
  
  
 0.568
rffG
DTDP-glucose 4,6-dehydratase. By similarity; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.552
CCK75576.1
Predicted UDP-glucose 6-dehydrogenase.
  
    0.549
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.