STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK75674.1Putative multidrug resistance protein (substrate binding lipoprotein); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (353 aa)    
Predicted Functional Partners:
CCK75675.1
Transporter, AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.960
CCK76740.1
Hypothetical cation/multidrug efflux pump protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.684
CCK77243.1
Putative AcrA/AcrE family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.665
CCK75673.1
Probable transcriptional regulator, TetR family.
 
     0.631
CCK77404.1
AcrB/AcrD/AcrF family.
 
   0.601
CCK77250.1
Hypothetical acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.567
CCK76748.1
Hypothetical acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.536
CCK74497.1
AcrB/AcrD/AcrF family cation efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.510
CCK77251.1
Efflux transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.491
CCK76338.1
Secretion protein HlyD.
 
   
 0.476
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.