STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK75764.1Conserved hypothetical protein. (355 aa)    
Predicted Functional Partners:
CCK75766.1
Conserved hypothetical protein.
 
  
 0.962
CCK75762.1
Conserved hypothetical protein.
 
   
 0.959
CCK75763.1
TPR domain protein.
     0.959
CCK75765.1
Conserved hypothetical protein.
 
     0.953
CCK75767.1
MoxR-like ATPase.
 
  
 0.944
CCK75382.1
TPR domain containing protein.
   
 
 0.584
cobN
CobN/magnesium chelatase.
  
 
 0.581
CCK75768.1
NAD-specific glutamate dehydrogenase.
       0.515
CCK76395.1
Conserved hypothetical protein.
 
  
 0.459
cmoB
Methyltransferase; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.
 
 
 
 0.453
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.