STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK76161.1Conserved hypothetical protein. (611 aa)    
Predicted Functional Partners:
CCK76153.1
Putative capsular polysaccharide biosynthesis glycosyltransferase.
 
  
 0.946
CCK76162.1
Putative polysaccharide export protein.
 
 
 0.939
cda1-2
Chitin deacetylase.
 
     0.844
CCK76160.1
Similar to polysaccharide transport proteins.
 
  
 0.826
kpsD
Polysialic acid transport protein KpsD.
  
 
 0.807
CCK76155.1
Polysaccharide biosynthesis family protein.
  
  
 0.792
CCK76156.1
Putative glycosyl transferase, group 1.
 
  
 0.787
CCK76157.1
Weak similarity to lycosyl transferase, group 1 superfamily.
  
  
 0.787
CCK76158.1
Glycosyl transferase, group 1. By similarity.
  
  
 0.787
CCK76154.1
Glycosyltransferase, RfaG.
  
  
 0.722
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.