STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK76373.1Conserved hypothetical protein. (144 aa)    
Predicted Functional Partners:
CCK76371.1
Conserved hypothetical protein.
 
   
 0.915
CCK76372.1
Amine oxidase, flavin-containing.
 
   
 0.912
CCK76382.1
Conserved hypothetical protein.
 
     0.862
cfa
Cyclopropane-fatty-acyl-phospholipid synthase.
 
     0.856
CCK76379.1
Short-chain dehydrogenase/reductase SDR.
 
   
 0.855
CCK76375.1
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
     0.835
CCK76374.1
Delta 9 acyl-lipid fatty acid desaturase.
       0.784
CCK76376.1
FAD dependent oxidoreductase.
       0.779
CCK76378.1
Putative anti-sigma factor, ChrR family.
 
     0.704
CCK74347.1
FAD dependent oxidoreductase.
 
   
 0.689
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.