STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK76598.1Siderophore synthetase component. (645 aa)    
Predicted Functional Partners:
CCK76599.1
IucA/IucC family protein.
  
0.990
CCK76597.1
Acyl-CoA synthase.
     0.981
CCK76596.1
Conserved hypothetical protein.
  
 
 0.961
CCK76595.1
Conserved hypothetical protein.
 
  
 0.908
CCK76594.1
Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.
  
  
 0.587
CCK76600.1
Putative multi antimicrobial extrusion protein MatE.
 
     0.568
CCK76593.1
Saccharopine dehydrogenase.
       0.487
carB-2
Carbenicillin-hydrolyzing beta-lactamase (By similarity).
  
     0.431
CCK76601.1
Hypothetical protein; Belongs to the P-Pant transferase superfamily.
       0.416
CCK77530.1
Conserved hypothetical protein.
  
     0.413
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.