STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK76607.1Siderophore-interacting protein. (261 aa)    
Predicted Functional Partners:
CCK76442.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
 
      0.579
CCK76606.1
Carbon-nitrogen hydrolase family protein.
       0.558
CCK76482.1
ZIP zinc transporter family protein probable.
   
    0.519
CCK76605.1
Conserved hypothetical protein; Belongs to the agmatine deiminase family.
     
 0.507
pkn32
Serine/threonine protein kinase.
   
  
 0.482
CCK76604.1
Hypothetical protein.
       0.461
hutD
ABC-type hemin transporter, ATP-binding protein.
 
  
 0.455
trpE
Anthranilate synthase component I, N terminal region; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismat [...]
  
  
 0.440
pabB
Para-aminobenzoate synthase, component I.
  
  
 0.440
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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