STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK76717.1Peptidase S8 and S53 subtilisin kexin sedolisin precursor; Belongs to the peptidase S8 family. (1003 aa)    
Predicted Functional Partners:
CCK77855.1
Regulator of chromosome condensation.
 
 
 
 0.783
CCK76716.1
Hypothetical protein.
       0.773
mshQ
MSHA biogenesis protein MshQ.
 
 
 0.577
ruvC
Crossover junction endodeoxyribonuclease; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
       0.529
CCK76153.1
Putative capsular polysaccharide biosynthesis glycosyltransferase.
 
     0.468
CCK78008.1
Conserved hypothetical protein.
 
 
 0.444
CCK76718.1
Hypothetical protein.
       0.443
CCK76907.1
Hypothetical protein.
  
     0.443
ruvA
Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.
  
    0.439
cinA
Competence/damage-inducible protein CinA; Belongs to the CinA family.
     
 0.436
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.