STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK76774.1Conserved hypothetical protein. (497 aa)    
Predicted Functional Partners:
CCK76775.1
Conserved hypothetical protein.
 
 0.999
CCK76773.1
Conserved hypothetical protein.
 
 
 0.995
CCK76783.1
OmpA family protein.
 
  
 0.995
CCK76776.1
Conserved hypothetical protein.
 
  
 0.964
CCK76786.1
Probable ClpA/B-type chaperone; Belongs to the ClpA/ClpB family.
 
 0.964
CCK76771.1
Conserved hypothetical protein.
 
  
 0.954
CCK76770.1
Conserved hypothetical protein.
 
  
 0.939
CCK76784.1
Conserved hypothetical protein.
 
  
 0.939
CCK76782.1
Conserved hypothetical protein.
  
 0.927
sciB
Putative cytoplasmic protein.
 
  
 0.914
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.