STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdS-4Type I site-specific deoxyribonuclease. (528 aa)    
Predicted Functional Partners:
hsdM-3
Type I restriction-modification system, modification subunit.
 
 0.960
CCK74835.1
Type I restriction enzyme EcoEI modification protein, probable fragment.
 
 0.925
hsdR-4
Type I restriction enzyme, restriction subunit.
 
 
 0.889
hsdR-2
Type I restriction enzyme EcoAI R protein.
 
 
 0.850
hsdM-4
Type I site-specific deoxyribonuclease, modification subunit.
 
 
 0.833
hsdM
Type I restriction-modification system, modification subunit.
 
 
 0.797
CCK77278.1
Conserved hypothetical protein.
       0.779
CCK77277.1
Conserved hypothetical protein.
       0.773
CCK77276.1
Probable GTPase subunit of restriction endonuclease.
  
  
 0.761
hsdM-2
Type I site-specific deoxyribonuclease.
 
 
 0.735
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.