STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpxRTranscriptional regulatory protein. (229 aa)    
Predicted Functional Partners:
CCK77821.1
Sensor protein.
 0.983
CCK77357.1
Sensor protein.
 
 0.954
CCK77822.1
Two component transcriptional regulator, winged helix family.
  
  
 
0.905
CCK77378.1
Putative sensor protein.
 
 0.865
CCK76946.1
Sensor protein.
 
 
0.842
CCK77827.1
Sensor protein.
 
 
0.837
CCK75438.1
Sensor protein.
 
 0.836
CCK75643.1
Sensor protein.
 
 
0.832
CCK77347.1
Sensor protein.
 
 0.816
CCK77581.1
Sensor protein.
 
   0.804
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.