STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK77473.1Putative sensor protein. (603 aa)    
Predicted Functional Partners:
CCK75643.1
Sensor protein.
 
0.959
gacA
Response regulator (Global activator).
 
  
  0.918
CCK75255.1
Diguanylate cyclase with GAF sensor.
 
  
 0.907
phoB
Phosphate regulon transcriptional regulatory protein.
 
   0.835
CCK74453.1
Sensor protein.
 
 
0.797
pilH
Type IV pilus response regulator.
 
 
   0.792
CCK76947.1
Response regulator receiver modulated metal dependent phosphohydrolase.
   0.780
CCK75395.1
CheY-like receiver protein.
 
   0.769
CCK76855.1
Response regulator receiver, CheY-like.
 
   0.753
CCK75275.1
Two component transcriptional regulator, winged helix family.
 
   0.748
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.