STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK77580.1Capsule polysaccharide export protein. By similarity. (378 aa)    
Predicted Functional Partners:
kpsE
Capsule transport protein KpsE. By similarity.
 
 
 
 0.808
kpsC
Capsule export protein KpsC. By similarity.
 
   
 0.781
kpsM
Putative capsule transport protein KpsM, ABC transmembrane type-2.
 
   
 0.768
kpsT
Capsule transport protein KpsT.
 
   
 0.765
kpsD
Polysialic acid transport protein KpsD.
 
   
 0.747
CCK76541.1
TonB-dependent receptor probable.
  
     0.531
CCK76540.1
Similar to lipoprotein.
  
     0.500
CCK77581.1
Sensor protein.
       0.453
CCK77582.1
Two component transcriptional regulator, winged helix family precursor.
       0.453
CCK77765.1
Conserved hypothetical protein.
  
     0.443
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.