STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK77652.1Conserved hypothetical protein. (847 aa)    
Predicted Functional Partners:
CCK75255.1
Diguanylate cyclase with GAF sensor.
  
 0.933
pilZ-2
Type IV pilus assembly protein PilZ.
    
   0.905
CCK76946.1
Sensor protein.
  
  
 0.898
CCK74682.1
FliG-like protein.
   
  
 0.891
CCK77756.1
Diguanylate cyclase (GGDEF domain).
  
 0.888
CCK75643.1
Sensor protein.
 
  
 0.886
CCK76423.1
Hypothetical protein.
 
 
 0.868
CCK77761.1
Hypothetical protein.
 
 
 0.868
CCK75105.1
Response regulator.
 
  
 0.842
CCK76904.1
PAS domain protein, probably.
  
 0.834
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.