STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK77855.1Regulator of chromosome condensation. (511 aa)    
Predicted Functional Partners:
CCK74803.1
Peptidase.
 
 
 
 0.783
CCK76717.1
Peptidase S8 and S53 subtilisin kexin sedolisin precursor; Belongs to the peptidase S8 family.
 
 
 
 0.783
sulP
Sulfate transporter.
    
   0.770
CCK77246.1
Sulfate permease family protein probable.
    
   0.770
CCK77873.1
NAD(P)H-flavin reductase.
   
 
 0.734
secY
Membrane protein SecY, protein translocase subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.647
CCK75132.1
Transmembrane cytochrome oxidase complex biogenesis factor.
    
   0.647
CCK77856.1
Conserved hypothetical protein.
     0.643
CCK77216.1
UBA/THIF-type NAD/FAD binding protein.
    
 0.581
hepA
ATP-dependent helicase.
    
 0.564
Your Current Organism:
Oleispira antarctica
NCBI taxonomy Id: 698738
Other names: O. antarctica RB-8, Oleispira antarctica DSM 14852, Oleispira antarctica RB-8, Oleispira antarctica str. RB-8, Oleispira antarctica strain RB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.