STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXY_03280Putative ABC transporter ATP-binding protein. (232 aa)    
Predicted Functional Partners:
AXY_04230
Putative ABC transporter permease protein.
  
 
 0.985
AXY_03270
Hypothetical protein.
 
 0.976
AXY_09580
Hypothetical protein.
 
 
 0.648
AXY_06540
ABC transporter permease protein.
 
 
 0.609
AXY_15860
Putative ABC transporter ATP-binding/permease protein.
 
 
0.604
AXY_03440
Hypothetical protein.
   
 
 0.569
AXY_01670
Hypothetical protein.
  
 
 0.556
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
   
 0.414
Your Current Organism:
Amphibacillus xylanus
NCBI taxonomy Id: 698758
Other names: A. xylanus NBRC 15112, Amphibacillus xylanus DSM 6626, Amphibacillus xylanus Ep01, Amphibacillus xylanus JCM 7361, Amphibacillus xylanus NBRC 15112, Amphibacillus xylanus str. NBRC 15112, Amphibacillus xylanus strain NBRC 15112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.