STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsbRModulator protein RsbR. (289 aa)    
Predicted Functional Partners:
rsbS
Antagonist protein RsbS.
 
 
0.991
rsbT
Protein synonym:anti-sigma B factor RsbT.
 
 
 0.988
rsbX
Phosphoserine phosphatase RsbX.
 
 
 0.973
rsbU
Phosphoserine phosphatase RsbU; Protein synonym:sigma factor B regulator protein.
 
 
 0.953
rsbW
Anti-sigma B factor; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B).
 
 
 0.926
fliY
Flagellar motor switch protein FliY.
  
   0.911
sigB
RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family.
 
 
 0.786
spoIIAB
Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
  
 
 0.727
rsbV
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
   
 0.719
fliG
Flagellar motor switch protein FliG.
  
   0.708
Your Current Organism:
Amphibacillus xylanus
NCBI taxonomy Id: 698758
Other names: A. xylanus NBRC 15112, Amphibacillus xylanus DSM 6626, Amphibacillus xylanus Ep01, Amphibacillus xylanus JCM 7361, Amphibacillus xylanus NBRC 15112, Amphibacillus xylanus str. NBRC 15112, Amphibacillus xylanus strain NBRC 15112
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.