STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugdUDP-glucose 6-dehydrogenase. (389 aa)    
Predicted Functional Partners:
gtaB
UTP--glucose-1-phosphate uridylyltransferase; Protein synonym:UDP-glucose pyrophosphorylase.
  
 0.954
AXY_19990
Protein synonym:UDP-glucuronate 4-epimerase.
 
 0.952
galE
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.921
ugd-2
UDP-glucose 6-dehydrogenase.
  
  
 
0.901
galT
Galactose-1-phosphate uridylyltransferase.
     
  0.800
AXY_20000
Hypothetical protein.
  
  
 0.777
glf
UDP-galactopyranose mutase.
  
  
 0.751
AXY_20260
Putative teichoic acid biosynthesis protein.
  
  
 0.562
AXY_20070
Putative UDP-sugar epimerase.
  
 
 0.521
AXY_20030
Putative glycosyltransferase.
  
  
 0.459
Your Current Organism:
Amphibacillus xylanus
NCBI taxonomy Id: 698758
Other names: A. xylanus NBRC 15112, Amphibacillus xylanus DSM 6626, Amphibacillus xylanus Ep01, Amphibacillus xylanus JCM 7361, Amphibacillus xylanus NBRC 15112, Amphibacillus xylanus str. NBRC 15112, Amphibacillus xylanus strain NBRC 15112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.