STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB71149.1Putative sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (361 aa)    
Predicted Functional Partners:
AGB71148.1
Putative sugar ABC transporter, ATP-binding protein.
 
 
 0.996
AGB71150.1
Putative sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
AGB71151.1
Basic membrane lipoprotein.
 
 
 0.987
AGB69672.1
Putative nucleoside ABC transporter, membrane spanning protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.986
AGB69670.1
Putative nucleoside ABC transporter, ATP-binding protein.
 
 
 0.983
AGB69669.1
Putative nucleoside ABC transporter, periplasmic binding protein.
 
 
 0.965
AGB69671.1
Putative nucleoside ABC transporter, membrane spanning protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.927
AGB71147.1
Putative quinone oxidoreductase.
       0.643
pcs
Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.492
AGB71153.1
Putative sugar ABC transporter, ATP-binding protein.
 
     0.450
Your Current Organism:
Rhizobium tropici
NCBI taxonomy Id: 698761
Other names: R. tropici CIAT 899, Rhizobium tropici CIAT 899, Rhizobium tropici str. CIAT 899, Rhizobium tropici strain CIAT 899
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.