STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB88607.1Signal transduction histidine kinase; InterPro IPR005467:IPR004358:IPR003594:IPR011712; COGs: COG4585 Signal transduction histidine kinase; KEGG: mta:Moth_0022 periplasmic sensor signal transduction histidine kinase; SPTR: Periplasmic sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region. (483 aa)    
Predicted Functional Partners:
SMB88611.1
Two component transcriptional regulator, LuxR family; InterPro IPR000792:IPR001789; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; KEGG: mta:Moth_0023 two component LuxR family transcriptional regulator; SPTR: Two component transcriptional regulator, LuxR family; SMART: response regulator receiver; regulatory protein LuxR; PFAM: response regulator receiver; regulatory protein LuxR; manually curated.
 
 0.975
SMB95356.1
Two component transcriptional regulator, LuxR family; InterPro IPR001789:IPR000792; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; KEGG: mta:Moth_0975 two component LuxR family transcriptional regulator; SPTR: Two component transcriptional regulator, LuxR family; SMART: regulatory protein LuxR; response regulator receiver; PFAM: response regulator receiver; regulatory protein LuxR.
 
 0.898
SMB98173.1
Two component transcriptional regulator, LuxR family; InterPro IPR001789:IPR000792; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; KEGG: tfu:Tfu_3035 LuxR response regulator receiver; SPTR: Two component transcriptional regulator, LuxR family; SMART: response regulator receiver; regulatory protein LuxR; PFAM: response regulator receiver; regulatory protein LuxR.
 
 0.898
SMB99321.1
Two component transcriptional regulator, LuxR family; InterPro IPR000792:IPR001789; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; KEGG: dhd:Dhaf_1194 two component transcriptional regulator, LuxR family; SPTR: Two component transcriptional regulator, LuxR family; SMART: response regulator receiver; regulatory protein LuxR; PFAM: response regulator receiver; regulatory protein LuxR.
 
 0.898
SMB98868.1
Two component transcriptional regulator, LuxR family; InterPro IPR000792:IPR001789; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; KEGG: ttr:Tter_1109 two component transcriptional regulator, LuxR family; SPTR: Two component transcriptional regulator, LuxR family; SMART: response regulator receiver; regulatory protein LuxR; PFAM: response regulator receiver; regulatory protein LuxR.
 
 0.897
SMB98641.1
PocR sensory domain-containing protein; InterPro IPR000792; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; KEGG: cbk:CLL_A1720 sigma-70, region 4 family; SPTR: Sigma-70, region 4 family; SMART: regulatory protein LuxR; PFAM: regulatory protein LuxR.
 
 0.892
serS
seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
       0.579
SMB98649.1
InterPro IPR001789; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG: cag:Cagg_0863 response regulator receiver modulated metal dependent phosphohydrolase; SPTR: Response regulator receiver modulated metal dependent phosphohydrolase; SMART: response regulator receiver; PFAM: response regulator receiver.
  
 0.555
SMB99324.1
Signal transduction histidine kinase; InterProIPR017204:IPR003660:IPR003594:IPR011712:IPR 005467:IPR004358; COGs: COG4585 Signal transduction histidine kinase; KEGG: dhd:Dhaf_1193 histidine kinase; SPTR: Sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein.
  
  
 
0.496
SMB93566.1
InterPro IPR007157; COGs: COG1842 Phage shock protein A (IM30) suppresses sigma54-dependent transcription; KEGG: mta:Moth_0716 phage shock protein A, PspA; SPTR: Phage shock protein A, PspA; PFAM: PspA/IM30 family protein.
  
    0.478
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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