STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB89511.1Stage II sporulation protein D; InterPro IPR014225:IPR013486:IPR013693; COGs: COG2385 Sporulation protein and related protein; KEGG: mta:Moth_2374 sporulation protein and related proteins; SPTR: Sporulation protein and related proteins; PFAM: Stage II sporulation protein D; TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain protein. (338 aa)    
Predicted Functional Partners:
SMB98305.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.933
SMB89514.1
Putative DeoR family transcriptional regulator, stage III sporulation protein D; InterPro IPR014208:IPR018356; KEGG: adg:Adeg_0086 sporulation transcriptional regulator SpoIIID; TIGRFAM: sporulation transcriptional regulator SpoIIID; SPTR: Transcription regulator of sigma-E/sigma-K-dependent gene spoIIID.
 
   
 0.855
SMB92899.1
Stage II sporulation protein P; InterPro IPR010897; KEGG: mta:Moth_0578 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P.
  
  
 0.807
SMB90329.1
InterPro IPR002508; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; KEGG: mta:Moth_2296 N-acetylmuramoyl-L-alanine amidase; SPTR: N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin.
 
 0.786
SMB89513.1
Peptidase family M23; InterPro IPR016047; COGs: COG4942 Membrane-bound metallopeptidase; KEGG: mta:Moth_2373 peptidase M23B; SPTR: Peptidase M23B; PFAM: Peptidase M23.
 
   
 0.774
SMB94403.1
Stage II sporulation protein R; InterPro IPR014202; KEGG: mta:Moth_0854 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Sporulation stage II protein R; TIGRFAM: stage II sporulation protein R.
  
   
 0.739
SMB98458.1
InterPro IPR010894; KEGG: mta:Moth_1375 stage V sporulation protein AD; SPTR: Stage V sporulation AD; PFAM: Stage V sporulation AD family protein; TIGRFAM: stage V sporulation protein AD.
  
   
 0.718
SMB92974.1
InterPro IPR010690; KEGG: mta:Moth_0592 putative stage IV sporulation YqfD; SPTR: Putative stage IV sporulation YqfD; PFAM: stage IV sporulation YqfD; TIGRFAM: sporulation protein YqfD.
  
  
 0.705
SMB98457.1
Stage V sporulation protein AE; InterPro IPR014204:IPR005562; KEGG: mta:Moth_1374 SpoVA protein; SPTR: SpoVA protein; PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AE.
  
     0.702
SMC00071.1
Serine phosphatase; InterPro IPR010822:IPR001932; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; KEGG: mta:Moth_0103 serine phosphatase; SPTR: Serine phosphatase; SMART: protein phosphatase 2C domain protein; PFAM: Stage II sporulation protein E; PRIAM: Phosphoprotein phosphatase.
 
   
 0.687
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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