STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB89513.1Peptidase family M23; InterPro IPR016047; COGs: COG4942 Membrane-bound metallopeptidase; KEGG: mta:Moth_2373 peptidase M23B; SPTR: Peptidase M23B; PFAM: Peptidase M23. (244 aa)    
Predicted Functional Partners:
SMB89511.1
Stage II sporulation protein D; InterPro IPR014225:IPR013486:IPR013693; COGs: COG2385 Sporulation protein and related protein; KEGG: mta:Moth_2374 sporulation protein and related proteins; SPTR: Sporulation protein and related proteins; PFAM: Stage II sporulation protein D; TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain protein.
 
   
 0.774
SMB89514.1
Putative DeoR family transcriptional regulator, stage III sporulation protein D; InterPro IPR014208:IPR018356; KEGG: adg:Adeg_0086 sporulation transcriptional regulator SpoIIID; TIGRFAM: sporulation transcriptional regulator SpoIIID; SPTR: Transcription regulator of sigma-E/sigma-K-dependent gene spoIIID.
  
    0.697
SMB94150.1
Flagellar motor switch protein FliN/FliY; COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; KEGG: mta:Moth_0805 flagellar motor switch protein; SPTR: CheC, inhibitor of MCP methylation; InterPro IPR012826:IPR007597:IPR001543:IPR001172; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; TIGRFAM: flagellar motor switch protein FliN.
   
   0.619
SMB96597.1
InterPro IPR001172:IPR001543; COGs: COG1886 Flagellar motor switch/type III secretory pathway protein; KEGG: CheC, inhibitor of MCP methylation / FliN fusion protein; SPTR: Flagellar motor switch protein FliY; PFAM: surface presentation of antigens (SPOA) protein.
   
   0.619
SMB98906.1
Penicillin-binding protein 1A; InterPro IPR003961:IPR011816:IPR001264:IPR001460; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); KEGG: mta:Moth_1710 penicillin-binding protein 1A; SPTR: Penicillin-binding protein 1A; SMART: Fibronectin type III domain protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Fibronectin type III domain protein; TIGRFAM: penicillin-binding protein, 1A family.
  
   
 0.570
SMB89432.1
Cyanophycin synthetase; InterProIPR011810:IPR011761:IPR018109:IPR003135:IPR 013221:IPR004101; COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; KEGG: cyanophycin synthetase; SPTR: Cyanophycin synthetase; PFAM: Mur ligase middle domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; cytoplasmic peptidoglycan synthetase domain protein; TIGRFAM: cyanophycin synthetase; Belongs to the MurCDEF family.
    
 0.523
SMB89531.1
Rod shape-determining protein MreB; InterPro IPR004753; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; KEGG: mta:Moth_2371 rod shape-determining protein Mbl; SPTR: Rod shape-determining protein MreB; PFAM: cell shape determining protein MreB/Mrl; TIGRFAM: cell shape determining protein, MreB/Mrl family.
     
 0.484
SMB89509.1
Cell division protein FtsB; InterPro IPR007060; KEGG: mta:Moth_0091 septum formation initiator; SPTR: Septum formation initiator; PFAM: Septum formation initiator.
       0.441
SMB92575.1
N-acetylmuramoyl-L-alanine amidase; InterPro IPR003646:IPR002508:IPR012854:IPR013247; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; KEGG: mta:Moth_0517 N-acetylmuramoyl-L-alanine amidase; SPTR: N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin; SH3 domain protein; PFAM: cell wall hydrolase/autolysin; copper amine oxidase-like domain-containing protein; SH3 type 3 domain protein; PRIAM: N-acetylmuramoyl-L-alanine amidase.
 
   
 0.423
SMB91482.1
Cell division transport system permease protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.418
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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