STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB91502.1UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities. (297 aa)    
Predicted Functional Partners:
SMB91505.1
Conserved hypothetical protein, cofD-related; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
  
 0.984
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
 
  
 0.934
SMB91501.1
Hypothetical protein; InterPro IPR013200:IPR000150:IPR006379; COGs: COG0561 hydrolase of the HAD superfamily; KEGG: mta:Moth_0257 HAD family hydrolase; SPTR: HAD-superfamily hydrolase subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB.
       0.832
SMB95018.1
Sigma 54 modulation protein; InterProIPR002078:IPR011608:IPR004701:IPR002178:IPR 003593:IPR002464:IPR001270; COGs: COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain; KEGG: tte:TTE0180 transcriptional regulator; SPTR: Sigma-54 interaction domain family protein; SMART: AAA ATPase; PFAM: sigma-54 factor interaction domain-containing protein; PRD domain protein; PTS system fructose subfamily IIA component; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2.
  
  
 0.773
SMB94484.1
Transcriptional antiterminator, BglG family; InterPro IPR011608:IPR002178:IPR013011; COGs: COG3711 Transcriptional antiterminator; KEGG: PTS modulated transcriptional regulator, MtlR family; SPTR: PTS modulated transcriptional regulator, MtlR family; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PRD domain protein; PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase.
  
  
 0.772
SMB95005.1
PTS system IIA component, Gat family; InterPro IPR002178; COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); KEGG: cbe:Cbei_2498 putative PTS IIA-like nitrogen-regulatory protein PtsN; SPTR: Phosphotransferase system mannitol/fructose-specific IIA domain-containing protein; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2.
  
  
 0.772
SMB91509.1
Hexapeptide repeat of succinyl-transferase; InterPro IPR018357:IPR001451; COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); KEGG: pth:PTH_2726 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.734
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.709
SMB91526.1
RNA polymerase, sigma 54 subunit, RpoN/SigL; InterPro IPR000394:IPR007046:IPR007634; COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; KEGG: mta:Moth_0261 sigma-54 (RpoN); SPTR: Sigma-54 (RpoN); PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; TIGRFAM: RNA polymerase sigma-54 factor, RpoN.
  
  
 0.709
uvrA
Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
     
 0.681
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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