STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB92290.1KEGG: mta:Moth_1463 hypothetical protein; SPTR: Putative uncharacterized protein. (77 aa)    
Predicted Functional Partners:
SMB92299.1
Spore germination protein KC; InterPro IPR008844; KEGG: mta:Moth_1462 spore germination B3 GerAC like; SPTR: Spore germination B3 GerAC like; PFAM: spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family.
       0.705
SMB92303.1
Spore germination protein KA; InterPro IPR004995; KEGG: mta:Moth_1461 GerA spore germination protein; SPTR: GerA spore germination protein; PFAM: GerA spore germination protein.
       0.697
SMB92306.1
Spore germination protein KB; InterPro IPR004761; KEGG: mta:Moth_1460 spore germination protein; SPTR: Spore germination protein; PFAM: Spore germination protein; TIGRFAM: spore germination protein.
       0.495
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.