STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB92589.1Transcriptional regulator, LysR family; InterPro IPR000847:IPR005119; COGs: COG0583 Transcriptional regulator; KEGG: mta:Moth_1877 LysR family transcriptional regulator; SPTR: Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR. (302 aa)    
Predicted Functional Partners:
SMB99737.1
Putative selenate reductase; InterProIPR017900:IPR013027:IPR017701:IPR017896:IPR 000759; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; KEGG: mta:Moth_1949 putative selenate reductase subunit YgfK; SPTR: FAD dependent oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: selenate reductase YgfK.
   
 
 0.474
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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