STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rodARod shape determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. (378 aa)    
Predicted Functional Partners:
SMB94665.1
Cell elongation-specific peptidoglycan D,D-transpeptidase; InterPro IPR005311:IPR001460; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; KEGG: mta:Moth_0911 peptidoglycan glycosyltransferase; SPTR: Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase.
 
 0.991
SMB92642.1
Peptidoglycan glycosyltransferase; InterPro IPR005311:IPR001460:IPR017790; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; KEGG: mta:Moth_0540 peptidoglycan glycosyltransferase; SPTR: Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2.
 
 0.981
SMB94305.1
InterPro IPR011927:IPR005311:IPR001460:IPR005543; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; KEGG: mta:Moth_0837 stage V sporulation protein D; SPTR: Stage V sporulation protein D; SMART: PASTA domain containing protein; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; PRIAM: Peptidoglycan glycosyltransferase; TIGRFAM: stage V sporulation protein D.
 
 0.979
murG
UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
 0.958
SMB94365.1
Cell division protein FtsQ; Essential cell division protein.
  
 
 0.941
SMB92635.1
Rod shape-determining protein MreC; InterPro IPR007221:IPR005223; COGs: COG1792 Cell shape-determining protein; KEGG: mta:Moth_0538 rod shape-determining protein MreC; SPTR: Rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC.
 
  
 0.912
SMB92632.1
Rod shape-determining protein MreB; InterPro IPR004753; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; KEGG: mta:Moth_0537 rod shape-determining protein MreB; SPTR: Rod shape-determining protein MreB; PFAM: cell shape determining protein MreB/Mrl; TIGRFAM: cell shape determining protein, MreB/Mrl family.
 
 
 0.904
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
  
 0.898
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
  
 0.875
mraY
Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
  
 0.848
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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