STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB93504.1Transcriptional regulator, IclR family; InterPro IPR005471:IPR014757; COGs: COG1414 Transcriptional regulator; KEGG: mta:Moth_0417 IclR family transcriptional regulator; SPTR: Transcriptional regulator, IclR family; SMART: regulatory protein IclR; PFAM: Transcriptional regulator IclR; regulatory protein IclR. (266 aa)    
Predicted Functional Partners:
SMB89163.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase; InterProIPR011895:IPR017896:IPR017900:IPR002880:IPR 019752:IPR019456:IPR011766; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; KEGG: mta:Moth_0064 pyruvate:ferredoxin (flavodoxin) oxidoreductase; SPTR: Pyruvate:ferredoxin (Flavodoxin) oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing p [...]
    
  0.695
SMB93507.1
Uncharacterized protein, YkwD family; InterPro IPR014044:IPR014258; COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; KEGG: mta:Moth_1705 allergen V5/TPX-1 related; SPTR: Allergen V5/Tpx-1 related; PFAM: SCP-like extracellular.
       0.561
SMB93501.1
2-dehydro-3-deoxygluconokinase; InterPro IPR011611; COGs: COG0524 Sugar kinase ribokinase family; KEGG: mta:Moth_0419 PfkB; SPTR: PfkB; PFAM: PfkB domain protein.
     
 0.506
SMB93497.1
InterPro IPR000887; COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; KEGG: mta:Moth_0420 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase; SPTR: 2-keto-3-deoxy-phosphogluconate aldolase; PFAM: KDPG and KHG aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase.
     
 0.409
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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