STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB94654.1FHA domain-containing protein; InterPro IPR000253; COGs: COG1716 FOG: FHA domain; KEGG: mta:Moth_0908 FHA domain-containing protein; SPTR: FHA domain containing protein; SMART: Forkhead-associated protein; PFAM: Forkhead-associated protein. (159 aa)    
Predicted Functional Partners:
SMB94670.1
Serine/threonine protein kinase; InterProIPR017442:IPR005543:IPR000719:IPR020635:IPR 002290:IPR008271; COGs: COG0515 Serine/threonine protein kinase; KEGG: mta:Moth_0912 serine/threonine protein kinase; SPTR: Serine/threonine protein kinase; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; PASTA domain containing protein; PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein.
 
 
 
 0.994
SMB94662.1
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; InterPro IPR001182; COGs: COG0772 Bacterial cell division membrane protein; KEGG: mta:Moth_0910 cell cycle protein; SPTR: Cell cycle protein; PFAM: cell cycle protein; Belongs to the SEDS family.
 
   
 0.958
SMB94665.1
Cell elongation-specific peptidoglycan D,D-transpeptidase; InterPro IPR005311:IPR001460; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; KEGG: mta:Moth_0911 peptidoglycan glycosyltransferase; SPTR: Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase.
 
   
 0.952
SMB94648.1
FHA domain-containing protein; InterPro IPR000253; COGs: COG1716 FOG: FHA domain; KEGG: mta:Moth_0907 FHA domain-containing protein; SPTR: FHA domain containing protein; SMART: Forkhead-associated protein; PFAM: Forkhead-associated protein.
 
     0.947
SMB94658.1
Protein phosphatase; InterPro IPR014045:IPR010822:IPR001932; COGs: COG0631 Serine/threonine protein phosphatase; KEGG: mta:Moth_0909 protein serine/threonine phosphatases; SPTR: Protein serine/threonine phosphatases; SMART: protein phosphatase 2C domain protein; PFAM: Protein phosphatase 2C-like; Stage II sporulation protein E.
 
  
 0.902
SMB94305.1
InterPro IPR011927:IPR005311:IPR001460:IPR005543; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; KEGG: mta:Moth_0837 stage V sporulation protein D; SPTR: Stage V sporulation protein D; SMART: PASTA domain containing protein; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; PRIAM: Peptidoglycan glycosyltransferase; TIGRFAM: stage V sporulation protein D.
   
 
 0.874
rlmN
23S rRNA (adenine2503-C2)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
  
    0.820
SMB95927.1
KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.795
rsgA
Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
       0.782
SMB94683.1
COGs: COG0036 Pentose-5-phosphate-3-epimerase; KEGG: mta:Moth_0914 ribulose-5-phosphate 3-epimerase; SPTR: Ribulose-5-phosphate 3-epimerase; InterPro IPR000056; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase.
       0.782
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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