STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB94892.1TadE-like protein; InterPro IPR012495; KEGG: pth:PTH_1447 flp pilus assembly protein TadG; SPTR: Flp pilus assembly protein TadG; PFAM: TadE family protein. (128 aa)    
Predicted Functional Partners:
SMB94882.1
InterPro IPR001789; COGs: COG4963 Flp pilus assembly protein ATPase CpaE; KEGG: pth:PTH_1450 response regulator; SPTR: Response regulator; SMART: response regulator receiver; PFAM: response regulator receiver.
 
  
 0.982
SMB94885.1
Pilus assembly protein CpaB; InterPro IPR017592:IPR013974; COGs: COG3745 Flp pilus assembly protein CpaB; KEGG: pth:PTH_1449 flp pilus assembly protein CpaB; SPTR: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; TIGRFAM: Flp pilus assembly protein CpaB.
 
  
 0.976
SMB94903.1
Prepilin peptidase CpaA; InterPro IPR000045; KEGG: pth:PTH_1446 type II secretory pathway, prepilin signal peptidase PulO and related peptidases, prepilin signal peptidase PulO and related peptidases; SPTR: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases, prepilin signal peptidase PulO and related peptidases; PFAM: peptidase A24A prepilin type IV.
 
  
 0.967
SMB94877.1
Tight adherence protein B; InterPro IPR018076; COGs: COG4965 Flp pilus assembly protein TadB; KEGG: pth:PTH_1452 flp pilus assembly protein TadC; SPTR: Flp pilus assembly protein TadC; PFAM: Type II secretion system F domain.
 
  
 0.964
SMB94889.1
Putative Flp pilus-assembly TadE/G-like; KEGG: protein of unknown function DUF2134, membrane; SPTR: Putative uncharacterized protein.
 
     0.961
SMB94871.1
Tight adherence protein C; InterPro IPR018076; COGs: COG4965 Flp pilus assembly protein TadB; KEGG: pth:PTH_1453 flp pilus assembly protein TadC; SPTR: Flp pilus assembly protein TadC; PFAM: Type II secretion system F domain.
 
    0.960
SMB94906.1
Pilus assembly protein Flp/PilA; InterPro IPR007047; KEGG: adg:Adeg_1035 Flp/Fap pilin component; SPTR: Flp/Fap pilin component; PFAM: Flp/Fap pilin component.
 
  
 0.956
SMB94879.1
Pilus assembly protein CpaF; InterPro IPR001482:IPR017975; COGs: COG4962 Flp pilus assembly protein ATPase CpaF; KEGG: pth:PTH_1451 type IV secretory pathway, VirB11 components, and related ATPase; SPTR: Type IV secretory pathway, VirB11 components, and related ATPase; PFAM: type II secretion system protein E.
 
    0.949
SMB94864.1
Hypothetical protein; InterPro IPR003795; COGs: COG1430 conserved hypothetical protein; KEGG: protein of unknown function DUF192; SPTR: Uncharacterized conserved protein; PFAM: protein of unknown function DUF192.
 
     0.917
SMB96502.1
Tight adherence protein B; InterPro IPR018076; COGs: COG4965 Flp pilus assembly protein TadB; KEGG: afn:Acfer_1186 type II secretion system F domain protein; SPTR: Type II secretion system F domain protein; PFAM: Type II secretion system F domain.
 
  
 0.855
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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