STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB95894.1KEGG: hypothetical protein; SPTR: Putative uncharacterized protein. (285 aa)    
Predicted Functional Partners:
SMB95899.1
KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
       0.769
SMB95895.1
PrgI family protein; KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
       0.767
SMB95893.1
KEGG: tpd:Teth39_0053 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.594
SMB95880.1
InterPro IPR003688; COGs: COG3505 Type IV secretory pathway VirD4 protein; KEGG: TraG family protein; SPTR: TraG/TraD family protein; PFAM: TRAG family protein.
       0.549
SMB95876.1
KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
       0.547
SMB95870.1
Ribbon-helix-helix protein, copG family; KEGG: tpd:Teth39_0050 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.524
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.