Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SMB97202.1 | rnc-2 | SAMN00808754_1785 | SAMN00808754_1454 | Hypothetical protein; InterPro IPR004013:IPR003141; COGs: COG0613 metal-dependent phosphoesterase (PHP family); KEGG: mta:Moth_1085 PHP-like; SPTR: PHP-like; SMART: phosphoesterase PHP domain protein; PFAM: PHP domain protein. | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.870 |
| rnc-2 | SMB97202.1 | SAMN00808754_1454 | SAMN00808754_1785 | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Hypothetical protein; InterPro IPR004013:IPR003141; COGs: COG0613 metal-dependent phosphoesterase (PHP family); KEGG: mta:Moth_1085 PHP-like; SPTR: PHP-like; SMART: phosphoesterase PHP domain protein; PFAM: PHP domain protein. | 0.870 |
| rnc-2 | rplM | SAMN00808754_1454 | SAMN00808754_0092 | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.867 |
| rnc-2 | rplS | SAMN00808754_1454 | SAMN00808754_1216 | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.891 |
| rnc-2 | rpmA | SAMN00808754_1454 | SAMN00808754_0720 | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | LSU ribosomal protein L27P; InterPro IPR001684:IPR018261; COGs: COG0211 Ribosomal protein L27; KEGG: tte:TTE0915 50S ribosomal protein L27; SPTR: 50S ribosomal protein L27; PFAM: ribosomal protein L27; TIGRFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.879 |
| rnc-2 | rpmF | SAMN00808754_1454 | SAMN00808754_1111 | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | InterPro IPR002677; COGs: COG0333 Ribosomal protein L32; KEGG: ribosomal protein L32; SPTR: 50S ribosomal protein L32; PFAM: ribosomal L32p protein; TIGRFAM: ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.874 |
| rnc-2 | rpsB | SAMN00808754_1454 | SAMN00808754_1253 | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | SSU ribosomal protein S2P; InterPro IPR018130:IPR005706:IPR001865; COGs: COG0052 Ribosomal protein S2; KEGG: mta:Moth_1032 SSU ribosomal protein S2P; SPTR: 30S ribosomal protein S2; PFAM: ribosomal protein S2; TIGRFAM: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.871 |
| rnc-2 | rpsF | SAMN00808754_1454 | SAMN00808754_3225 | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. | 0.898 |
| rnc-2 | rpsI | SAMN00808754_1454 | SAMN00808754_0093 | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | SSU ribosomal protein S9P; InterPro IPR020574:IPR000754; COGs: COG0103 Ribosomal protein S9; KEGG: mta:Moth_2424 SSU ribosomal protein S9P; SPTR: 30S ribosomal protein S9; PFAM: ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.875 |
| rnc-2 | rpsL | SAMN00808754_1454 | SAMN00808754_0053 | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.866 |
| rnc-2 | rpsP | SAMN00808754_1454 | SAMN00808754_1212 | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | SSU ribosomal protein S16P; InterPro IPR000307:IPR020592; COGs: COG0228 Ribosomal protein S16; KEGG: mta:Moth_0967 SSU ribosomal protein S16P; PFAM: ribosomal protein S16; TIGRFAM: ribosomal protein S16; SPTR: 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.866 |
| rplM | rnc-2 | SAMN00808754_0092 | SAMN00808754_1454 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.867 |
| rplM | rplS | SAMN00808754_0092 | SAMN00808754_1216 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.997 |
| rplM | rpmA | SAMN00808754_0092 | SAMN00808754_0720 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L27P; InterPro IPR001684:IPR018261; COGs: COG0211 Ribosomal protein L27; KEGG: tte:TTE0915 50S ribosomal protein L27; SPTR: 50S ribosomal protein L27; PFAM: ribosomal protein L27; TIGRFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.997 |
| rplM | rpmF | SAMN00808754_0092 | SAMN00808754_1111 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | InterPro IPR002677; COGs: COG0333 Ribosomal protein L32; KEGG: ribosomal protein L32; SPTR: 50S ribosomal protein L32; PFAM: ribosomal L32p protein; TIGRFAM: ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.994 |
| rplM | rpsB | SAMN00808754_0092 | SAMN00808754_1253 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S2P; InterPro IPR018130:IPR005706:IPR001865; COGs: COG0052 Ribosomal protein S2; KEGG: mta:Moth_1032 SSU ribosomal protein S2P; SPTR: 30S ribosomal protein S2; PFAM: ribosomal protein S2; TIGRFAM: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.997 |
| rplM | rpsF | SAMN00808754_0092 | SAMN00808754_3225 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. | 0.994 |
| rplM | rpsI | SAMN00808754_0092 | SAMN00808754_0093 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S9P; InterPro IPR020574:IPR000754; COGs: COG0103 Ribosomal protein S9; KEGG: mta:Moth_2424 SSU ribosomal protein S9P; SPTR: 30S ribosomal protein S9; PFAM: ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| rplM | rpsL | SAMN00808754_0092 | SAMN00808754_0053 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.995 |
| rplM | rpsP | SAMN00808754_0092 | SAMN00808754_1212 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S16P; InterPro IPR000307:IPR020592; COGs: COG0228 Ribosomal protein S16; KEGG: mta:Moth_0967 SSU ribosomal protein S16P; PFAM: ribosomal protein S16; TIGRFAM: ribosomal protein S16; SPTR: 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.996 |
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