STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB96424.1InterPro IPR012840:IPR007197; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; KEGG: adg:Adeg_0893 anaerobic ribonucleoside-triphosphate reductase activating protein; SPTR: Anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein. (247 aa)    
Predicted Functional Partners:
SMB96420.1
Ribonucleoside-triphosphate reductase class III catalytic subunit; InterPro IPR012833:IPR005144; COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; KEGG: adg:Adeg_0892 anaerobic ribonucleoside-triphosphate reductase; SPTR: Anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone domain protein; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase.
  
 0.994
SMB91238.1
Ribonucleoside-triphosphate reductase class III catalytic subunit; InterPro IPR005144:IPR012833; COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; KEGG: mta:Moth_1449 anaerobic ribonucleoside triphosphate reductase; SPTR: Ribonucleoside-triphosphate reductase, anaerobic; PFAM: ATP-cone domain protein; PRIAM: Ribonucleoside-triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase.
  
 0.980
SMB98640.1
4-hydroxyphenylacetate decarboxylase subunit B; InterPro IPR004184:IPR001150; COGs: COG1882 Pyruvate-formate lyase; KEGG: cbt:CLH_1872 4-hydroxyphenylacetate decarboxylase, catalytic subunit; SPTR: 4-hydroxyphenylacetate decarboxylase, catalytic subunit; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical.
  
  
 0.797
SMB96425.1
DNA adenine methylase; InterPro IPR002052:IPR012326:IPR002294:IPR012327; COGs: COG0338 Site-specific DNA methylase; KEGG: pth:PTH_1936 site-specific DNA methylase; SPTR: Site-specific DNA methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); TIGRFAM: DNA adenine methylase.
       0.773
SMB89163.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase; InterProIPR011895:IPR017896:IPR017900:IPR002880:IPR 019752:IPR019456:IPR011766; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; KEGG: mta:Moth_0064 pyruvate:ferredoxin (flavodoxin) oxidoreductase; SPTR: Pyruvate:ferredoxin (Flavodoxin) oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing p [...]
     
 0.488
SMB99149.1
Pyruvate kinase; InterPro IPR001697:IPR015793:IPR015794; COGs: COG0469 Pyruvate kinase; KEGG: mta:Moth_1867 pyruvate kinase; SPTR: Pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PRIAM: Pyruvate kinase; TIGRFAM: pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.459
SMB96427.1
Spore photoproduct lyase; InterPro IPR007197; COGs: COG1533 DNA repair photolyase; KEGG: adg:Adeg_0709 radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM domain protein.
       0.412
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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