STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB96508.1Transposase; InterPro IPR010095; KEGG: adg:Adeg_0745 transposase IS605 OrfB; SPTR: Transposase IS605 OrfB; PFAM: transposase IS605 OrfB. (476 aa)    
Predicted Functional Partners:
SMB96509.1
DNA binding domain-containing protein, excisionase family; InterPro IPR006118:IPR000551:IPR006119; COGs: COG2452 site-specific integrase-resolvase; KEGG: dau:Daud_1710 resolvase domain-containing protein; SPTR: Resolvase, N-terminal domain; SMART: regulatory protein MerR; PFAM: Resolvase domain; regulatory protein MerR.
 
  
 0.947
SMB97059.1
KEGG: adg:Adeg_1807 IS605 family transposase OrfB; SPTR: IS605 family transposase OrfB.
  
     0.766
SMB97052.1
DNA binding domain-containing protein, excisionase family; InterPro IPR006118:IPR010093:IPR000551:IPR006119; COGs: COG2452 site-specific integrase-resolvase; KEGG: adg:Adeg_1808 DNA binding domain protein, excisionase family; SPTR: DNA binding domain protein, excisionase family; PFAM: Resolvase domain; regulatory protein MerR; TIGRFAM: DNA binding domain protein, excisionase family.
 
  
 0.765
SMB98209.1
mRNA interferase RelE/StbE; InterPro IPR007712; KEGG: aau:AAur_0707 addiction module toxin, RelE/StbE; SPTR: Addiction module toxin, RelE/StbE; PFAM: plasmid stabilization system.
 
     0.760
SMB96214.1
Putative transposase; InterPro IPR001959:IPR010095; COGs: COG0675 Transposase and inactivated derivatives; KEGG: adg:Adeg_0866 transposase IS605 OrfB; SPTR: Transposase IS605 OrfB; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; manually curated.
  
     0.751
SMB94517.1
InterPro IPR003814; COGs: COG2191 Formylmethanofuran dehydrogenase subunit E; KEGG: formylmethanofuran dehydrogenase subunit E region; SPTR: Formylmethanofuran dehydrogenase, subunit E region; PFAM: formylmethanofuran dehydrogenase subunit E region.
  
     0.690
mprF
Conserved hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
  
     0.667
SMB97165.1
Site-specific DNA recombinase; InterPro IPR006119:IPR011109; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; SPTR: Resolvase domain protein; PFAM: Resolvase domain; Recombinase; KEGG: pjd:Pjdr2_1608 resolvase domain protein.
  
     0.649
SMB95980.1
Site-specific DNA recombinase; InterPro IPR006119:IPR011109; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; KEGG: pjd:Pjdr2_1608 resolvase domain protein; SPTR: Resolvase domain protein; PFAM: Resolvase domain; Recombinase.
  
     0.648
SMB99131.1
Protein of unknown function; InterPro IPR012854; KEGG: copper amine oxidase domain protein; SPTR: Copper amine oxidase domain protein; PFAM: copper amine oxidase-like domain-containing protein.
  
    0.644
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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